Date: 2016-07-24T17:16:16+00:00

Actual source code: submatfree.c
petsc-3.7.3 2016-07-24
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      1: #include <petsctao.h>   /*I "petsctao.h" I*/
      2: #include <../src/tao/matrix/submatfree.h> /*I "submatfree.h" I*/

      6: /*@C
      7:   MatCreateSubMatrixFree - Creates a reduced matrix by masking a
      8:   full matrix.

     10:    Collective on matrix

     12:    Input Parameters:
     13: +  mat - matrix of arbitrary type
     14: .  Rows - the rows that will be in the submatrix
     15: -  Cols - the columns that will be in the submatrix

     17:    Output Parameters:
     18: .  J - New matrix

     20:    Notes:
     21:    The user provides the input data and is responsible for destroying
     22:    this data after matrix J has been destroyed.

     24:    Level: developer

     26: .seealso: MatCreate()
     27: @*/
     28: PetscErrorCode MatCreateSubMatrixFree(Mat mat,IS Rows, IS Cols, Mat *J)
     29: {
     30:   MPI_Comm         comm=((PetscObject)mat)->comm;
     31:   MatSubMatFreeCtx ctx;
     32:   PetscErrorCode   ierr;
     33:   PetscMPIInt      size;
     34:   PetscInt         mloc,nloc,m,n;

     37:   PetscNew(&ctx);
     38:   ctx->A=mat;
     39:   MatGetSize(mat,&m,&n);
     40:   MatGetLocalSize(mat,&mloc,&nloc);
     41:   MPI_Comm_size(comm,&size);
     42:   if (size == 1) {
     43:     VecCreateSeq(comm,n,&ctx->VC);
     44:   } else {
     45:     VecCreateMPI(comm,nloc,n,&ctx->VC);
     46:   }
     47:   ctx->VR=ctx->VC;
     48:    PetscObjectReference((PetscObject)mat);

     51:   ctx->Rows = Rows;
     52:   ctx->Cols = Cols;
     53:   PetscObjectReference((PetscObject)Rows);
     54:   PetscObjectReference((PetscObject)Cols);
     55:   MatCreateShell(comm,mloc,nloc,m,n,ctx,J);

     57:   MatShellSetOperation(*J,MATOP_MULT,(void(*)(void))MatMult_SMF);
     58:   MatShellSetOperation(*J,MATOP_DESTROY,(void(*)(void))MatDestroy_SMF);
     59:   MatShellSetOperation(*J,MATOP_VIEW,(void(*)(void))MatView_SMF);
     60:   MatShellSetOperation(*J,MATOP_MULT_TRANSPOSE,(void(*)(void))MatMultTranspose_SMF);
     61:   MatShellSetOperation(*J,MATOP_DIAGONAL_SET,(void(*)(void))MatDiagonalSet_SMF);
     62:   MatShellSetOperation(*J,MATOP_SHIFT,(void(*)(void))MatShift_SMF);
     63:   MatShellSetOperation(*J,MATOP_EQUAL,(void(*)(void))MatEqual_SMF);
     64:   MatShellSetOperation(*J,MATOP_SCALE,(void(*)(void))MatScale_SMF);
     65:   MatShellSetOperation(*J,MATOP_TRANSPOSE,(void(*)(void))MatTranspose_SMF);
     66:   MatShellSetOperation(*J,MATOP_GET_DIAGONAL,(void(*)(void))MatGetDiagonal_SMF);
     67:   MatShellSetOperation(*J,MATOP_GET_SUBMATRICES,(void(*)(void))MatGetSubMatrices_SMF);
     68:   MatShellSetOperation(*J,MATOP_NORM,(void(*)(void))MatNorm_SMF);
     69:   MatShellSetOperation(*J,MATOP_DUPLICATE,(void(*)(void))MatDuplicate_SMF);
     70:   MatShellSetOperation(*J,MATOP_GET_SUBMATRIX,(void(*)(void))MatGetSubMatrix_SMF);
     71:   MatShellSetOperation(*J,MATOP_GET_ROW_MAX,(void(*)(void))MatDuplicate_SMF);

     73:   PetscLogObjectParent((PetscObject)mat,(PetscObject)(*J));
     74:   return(0);
     75: }

     79: PetscErrorCode MatSMFResetRowColumn(Mat mat,IS Rows,IS Cols){
     80:   MatSubMatFreeCtx ctx;
     81:   PetscErrorCode   ierr;

     84:   MatShellGetContext(mat,(void **)&ctx);
     85:   ISDestroy(&ctx->Rows);
     86:   ISDestroy(&ctx->Cols);
     87:   PetscObjectReference((PetscObject)Rows);
     88:   PetscObjectReference((PetscObject)Cols);
     89:   ctx->Cols=Cols;
     90:   ctx->Rows=Rows;
     91:   return(0);
     92: }

     96: PetscErrorCode MatMult_SMF(Mat mat,Vec a,Vec y)
     97: {
     98:   MatSubMatFreeCtx ctx;
     99:   PetscErrorCode   ierr;

    102:   MatShellGetContext(mat,(void **)&ctx);
    103:   VecCopy(a,ctx->VR);
    104:   VecISSet(ctx->VR,ctx->Cols,0.0);
    105:   MatMult(ctx->A,ctx->VR,y);
    106:   VecISSet(y,ctx->Rows,0.0);
    107:   return(0);
    108: }

    112: PetscErrorCode MatMultTranspose_SMF(Mat mat,Vec a,Vec y)
    113: {
    114:   MatSubMatFreeCtx ctx;
    115:   PetscErrorCode   ierr;

    118:   MatShellGetContext(mat,(void **)&ctx);
    119:   VecCopy(a,ctx->VC);
    120:   VecISSet(ctx->VC,ctx->Rows,0.0);
    121:   MatMultTranspose(ctx->A,ctx->VC,y);
    122:   VecISSet(y,ctx->Cols,0.0);
    123:   return(0);
    124: }

    128: PetscErrorCode MatDiagonalSet_SMF(Mat M, Vec D,InsertMode is)
    129: {
    130:   MatSubMatFreeCtx ctx;
    131:   PetscErrorCode   ierr;

    134:   MatShellGetContext(M,(void **)&ctx);
    135:   MatDiagonalSet(ctx->A,D,is);
    136:   return(0);
    137: }

    141: PetscErrorCode MatDestroy_SMF(Mat mat)
    142: {
    143:   PetscErrorCode   ierr;
    144:   MatSubMatFreeCtx ctx;

    147:   MatShellGetContext(mat,(void **)&ctx);
    148:   MatDestroy(&ctx->A);
    149:   ISDestroy(&ctx->Rows);
    150:   ISDestroy(&ctx->Cols);
    151:   VecDestroy(&ctx->VC);
    152:   PetscFree(ctx);
    153:   return(0);
    154: }

    160: PetscErrorCode MatView_SMF(Mat mat,PetscViewer viewer)
    161: {
    162:   PetscErrorCode   ierr;
    163:   MatSubMatFreeCtx ctx;

    166:   MatShellGetContext(mat,(void **)&ctx);
    167:   MatView(ctx->A,viewer);
    168:   return(0);
    169: }

    173: PetscErrorCode MatShift_SMF(Mat Y, PetscReal a)
    174: {
    175:   PetscErrorCode   ierr;
    176:   MatSubMatFreeCtx ctx;

    179:   MatShellGetContext(Y,(void **)&ctx);
    180:   MatShift(ctx->A,a);
    181:   return(0);
    182: }

    186: PetscErrorCode MatDuplicate_SMF(Mat mat,MatDuplicateOption op,Mat *M)
    187: {
    188:   PetscErrorCode   ierr;
    189:   MatSubMatFreeCtx ctx;

    192:   MatShellGetContext(mat,(void **)&ctx);
    193:   MatCreateSubMatrixFree(ctx->A,ctx->Rows,ctx->Cols,M);
    194:   return(0);
    195: }

    199: PetscErrorCode MatEqual_SMF(Mat A,Mat B,PetscBool *flg)
    200: {
    201:   PetscErrorCode    ierr;
    202:   MatSubMatFreeCtx  ctx1,ctx2;
    203:   PetscBool         flg1,flg2,flg3;

    206:   MatShellGetContext(A,(void **)&ctx1);
    207:   MatShellGetContext(B,(void **)&ctx2);
    208:   ISEqual(ctx1->Rows,ctx2->Rows,&flg2);
    209:   ISEqual(ctx1->Cols,ctx2->Cols,&flg3);
    210:   if (flg2==PETSC_FALSE || flg3==PETSC_FALSE){
    211:     *flg=PETSC_FALSE;
    212:   } else {
    213:     MatEqual(ctx1->A,ctx2->A,&flg1);
    214:     if (flg1==PETSC_FALSE){ *flg=PETSC_FALSE;}
    215:     else { *flg=PETSC_TRUE;}
    216:   }
    217:   return(0);
    218: }

    222: PetscErrorCode MatScale_SMF(Mat mat, PetscReal a)
    223: {
    224:   PetscErrorCode   ierr;
    225:   MatSubMatFreeCtx ctx;

    228:   MatShellGetContext(mat,(void **)&ctx);
    229:   MatScale(ctx->A,a);
    230:   return(0);
    231: }

    235: PetscErrorCode MatTranspose_SMF(Mat mat,Mat *B)
    236: {
    238:   PetscFunctionReturn(1);
    239: }

    243: PetscErrorCode MatGetDiagonal_SMF(Mat mat,Vec v)
    244: {
    245:   PetscErrorCode   ierr;
    246:   MatSubMatFreeCtx ctx;

    249:   MatShellGetContext(mat,(void **)&ctx);
    250:   MatGetDiagonal(ctx->A,v);
    251:   return(0);
    252: }

    256: PetscErrorCode MatGetRowMax_SMF(Mat M, Vec D)
    257: {
    258:   MatSubMatFreeCtx ctx;
    259:   PetscErrorCode   ierr;

    262:   MatShellGetContext(M,(void **)&ctx);
    263:   MatGetRowMax(ctx->A,D,NULL);
    264:   return(0);
    265: }

    269: PetscErrorCode MatGetSubMatrices_SMF(Mat A,PetscInt n, IS *irow,IS *icol,MatReuse scall,Mat **B)
    270: {
    272:   PetscInt       i;

    275:   if (scall == MAT_INITIAL_MATRIX) {
    276:     PetscMalloc1(n+1,B );
    277:   }

    279:   for ( i=0; i<n; i++ ) {
    280:     MatGetSubMatrix_SMF(A,irow[i],icol[i],scall,&(*B)[i]);
    281:   }
    282:   return(0);
    283: }

    287: PetscErrorCode MatGetSubMatrix_SMF(Mat mat,IS isrow,IS iscol,MatReuse cll,
    288:                         Mat *newmat)
    289: {
    290:   PetscErrorCode   ierr;
    291:   MatSubMatFreeCtx ctx;

    294:   MatShellGetContext(mat,(void **)&ctx);
    295:   if (newmat){
    296:     MatDestroy(&*newmat);
    297:   }
    298:   MatCreateSubMatrixFree(ctx->A,isrow,iscol, newmat);
    299:   return(0);
    300: }

    304: PetscErrorCode MatGetRow_SMF(Mat mat,PetscInt row,PetscInt *ncols,const PetscInt **cols,const PetscScalar **vals)
    305: {
    306:   PetscErrorCode   ierr;
    307:   MatSubMatFreeCtx ctx;

    310:   MatShellGetContext(mat,(void **)&ctx);
    311:   MatGetRow(ctx->A,row,ncols,cols,vals);
    312:   return(0);
    313: }

    317: PetscErrorCode MatRestoreRow_SMF(Mat mat,PetscInt row,PetscInt *ncols,const PetscInt **cols,const PetscScalar **vals)
    318: {
    319:   PetscErrorCode   ierr;
    320:   MatSubMatFreeCtx ctx;

    323:   MatShellGetContext(mat,(void **)&ctx);
    324:   MatRestoreRow(ctx->A,row,ncols,cols,vals);
    325:   return(0);
    326: }

    330: PetscErrorCode MatGetColumnVector_SMF(Mat mat,Vec Y, PetscInt col)
    331: {
    332:   PetscErrorCode   ierr;
    333:   MatSubMatFreeCtx ctx;

    336:   MatShellGetContext(mat,(void **)&ctx);
    337:   MatGetColumnVector(ctx->A,Y,col);
    338:   return(0);
    339: }

    343: PetscErrorCode MatConvert_SMF(Mat mat,MatType newtype,Mat *NewMat)
    344: {
    345:   PetscErrorCode    ierr;
    346:   PetscMPIInt       size;
    347:   MatSubMatFreeCtx  ctx;

    350:   MatShellGetContext(mat,(void **)&ctx);
    351:   MPI_Comm_size(((PetscObject)mat)->comm,&size);
    352:   PetscFunctionReturn(1);
    353: }

    357: PetscErrorCode MatNorm_SMF(Mat mat,NormType type,PetscReal *norm)
    358: {
    359:   PetscErrorCode    ierr;
    360:   MatSubMatFreeCtx  ctx;

    363:   MatShellGetContext(mat,(void **)&ctx);
    364:   if (type == NORM_FROBENIUS) {
    365:     *norm = 1.0;
    366:   } else if (type == NORM_1 || type == NORM_INFINITY) {
    367:     *norm = 1.0;
    368:   } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"No two norm");
    369:   return(0);
    370: }