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nipype.algorithms.misc

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Interfaces and Algorithms¶

Release:	0.4.1
Date:	October 19, 2011, 05:50 PDT

nipype.algorithms.misc
- CreateNifti
- Distance
- ModifyAffine
- Overlap
- PickAtlas
- SimpleThreshold
- TSNR
nipype.algorithms.modelgen
- SpecifyModel
- SpecifySPMModel
- SpecifySparseModel
- SpecifySparseSPMModel
nipype.algorithms.rapidart
- ArtifactDetect
- StimulusCorrelation
nipype.interfaces.camino.connectivity
- Conmap
nipype.interfaces.camino.convert
- AnalyzeHeader
- DT2NIfTI
- Image2Voxel
- NIfTIDT2Camino
- ProcStreamlines
- TractShredder
- VtkStreamlines
nipype.interfaces.camino.dti
- ComputeEigensystem
- ComputeFractionalAnisotropy
- ComputeMeanDiffusivity
- ComputeTensorTrace
- DTIFit
- DTLUTGen
- ModelFit
- PicoPDFs
- Track
- TrackBallStick
- TrackBayesDirac
- TrackBootstrap
- TrackDT
- TrackPICo
nipype.interfaces.camino2trackvis.convert
- Camino2Trackvis
- Trackvis2Camino
nipype.interfaces.cmtk.cmtk
- CreateMatrix
- ROIGen
nipype.interfaces.cmtk.convert
- CFFConverter
- MergeCNetworks
nipype.interfaces.dcm2nii
- Dcm2nii
nipype.interfaces.diffusion_toolkit.base
- Info
nipype.interfaces.diffusion_toolkit.dti
- DTIRecon
- DTITracker
nipype.interfaces.diffusion_toolkit.odf
- HARDIMat
- ODFRecon
- ODFTracker
nipype.interfaces.diffusion_toolkit.postproc
- SplineFilter
nipype.interfaces.freesurfer.base
- Info
nipype.interfaces.freesurfer.model
- Binarize
- Concatenate
- GLMFit
- Label2Vol
- MRISPreproc
- OneSampleTTest
- SegStats
nipype.interfaces.freesurfer.preprocess
- ApplyVolTransform
- BBRegister
- DICOMConvert
- FitMSParams
- MRIConvert
- ParseDICOMDir
- ReconAll
- Resample
- RobustRegister
- Smooth
- SynthesizeFLASH
- UnpackSDICOMDir
nipype.interfaces.freesurfer.utils
- ApplyMask
- ImageInfo
- MRIsConvert
- SampleToSurface
- SurfaceSmooth
- SurfaceSnapshots
- SurfaceTransform
nipype.interfaces.fsl.base
- Info
nipype.interfaces.fsl.dti
- BEDPOSTX
- DTIFit
- DistanceMap
- EddyCorrect
- FindTheBiggest
- MakeDyadicVectors
- ProbTrackX
- ProjThresh
- TractSkeleton
- VecReg
- XFibres
nipype.interfaces.fsl.maths
- ApplyMask
- ApplyMaskInput
- BinaryMaths
- BinaryMathsInput
- ChangeDataType
- ChangeDataTypeInput
- DilateImage
- DilateInput
- ErodeImage
- ErodeInput
- IsotropicSmooth
- IsotropicSmoothInput
- KernelInput
- MathsCommand
- MathsInput
- MathsOutput
- MeanImage
- MeanImageInput
- MultiImageMaths
- MultiImageMathsInput
- SpatialFilter
- SpatialFilterInput
- TemporalFilter
- TemporalFilterInput
- Threshold
- UnaryMaths
- UnaryMathsInput
nipype.interfaces.fsl.model
- Cluster
- ContrastMgr
- FEAT
- FEATModel
- FEATRegister
- FILMGLS
- FLAMEO
- L2Model
- Level1Design
- MELODIC
- MultipleRegressDesign
- Randomise
- SMM
- SmoothEstimate
nipype.interfaces.fsl.preprocess
- ApplyWarp
- ApplyXfm
- BET
- FAST
- FLIRT
- FNIRT
- FUGUE
- MCFLIRT
- PRELUDE
- SUSAN
- SliceTimer
nipype.interfaces.fsl.utils
- ConvertXFM
- ExtractROI
- FilterRegressor
- ImageMaths
- ImageMeants
- ImageStats
- Merge
- Overlay
- PlotMotionParams
- PlotTimeSeries
- PowerSpectrum
- Slicer
- Smooth
- Split
- SwapDimensions
nipype.interfaces.io
- DataGrabber
- DataSink
- FreeSurferSource
- IOBase
- SQLiteSink
- XNATSink
- XNATSource
nipype.interfaces.nipy.model
- EstimateContrast
- FitGLM
nipype.interfaces.nipy.preprocess
- ComputeMask
nipype.interfaces.nitime.analysis
- CoherenceAnalyzer
- GetTimeSeries
nipype.interfaces.slicer
- SlicerCommandLine
nipype.interfaces.spm.base
- Info
- SPMCommand
nipype.interfaces.spm.model
- EstimateContrast
- EstimateModel
- FactorialDesign
- Level1Design
- MultipleRegressionDesign
- OneSampleTTestDesign
- PairedTTestDesign
- Threshold
- ThresholdStatistics
- TwoSampleTTestDesign
nipype.interfaces.spm.preprocess
- Coregister
- DARTEL
- DARTELNorm2MNI
- NewSegment
- Normalize
- Realign
- Segment
- SliceTiming
- Smooth
nipype.interfaces.spm.utils
- Analyze2nii
nipype.interfaces.utility
- AssertEqual
- Function
- IdentityInterface
- Merge
- Rename
- Select
- Split
nipype.workflows.freesurfer.utils
- create_get_stats_flow()